Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gm13183-201ENSMUST00000118615 789 ntBASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gm13616-201ENSMUST00000120600 222 ntBASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gm22175-201ENSMUST00000175007 78 ntBASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa1Q8VEE4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Gm44872-201ENSMUST00000207864 420 ntBASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpa1Q8VEE4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rpa1Q8VEE4 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.9□□□□□ -0.35
Rpa1Q8VEE4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rpa1Q8VEE4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rpa1Q8VEE4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rpa1Q8VEE4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpa1Q8VEE4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpa1Q8VEE4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rpa1Q8VEE4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpa1Q8VEE4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpa1Q8VEE4 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpa1Q8VEE4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpa1Q8VEE4 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.89□□□□□ -0.35
Rpa1Q8VEE4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms