Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Gm42693-201ENSMUST00000196779 631 ntBASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Snord83b-201ENSMUST00000104546 94 ntBASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm12291-201ENSMUST00000121627 311 ntBASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm7809-201ENSMUST00000153199 742 ntBASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Mir1938-201ENSMUST00000158746 100 ntBASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm23363-201ENSMUST00000175024 79 ntBASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm38002-201ENSMUST00000193255 180 ntBASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rprd1aQ8VDS4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Gm18584-201ENSMUST00000203098 964 ntBASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rprd1aQ8VDS4 Gm9823-201ENSMUST00000051212 327 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms