Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Gm11918-201ENSMUST00000121660 179 ntBASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps39Q8R5L3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Gm14921-201ENSMUST00000118643 908 ntBASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Gm10156-201ENSMUST00000122364 462 ntBASIC12.79□□□□□ -0.36
Vps39Q8R5L3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Gm23984-201ENSMUST00000157139 203 ntBASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Gm37922-201ENSMUST00000195596 455 ntBASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Gm6180-201ENSMUST00000065243 498 ntBASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps39Q8R5L3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.78□□□□□ -0.36
Vps39Q8R5L3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms