Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Gm4984-201ENSMUST00000115987 360 ntBASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Gm14921-201ENSMUST00000118643 908 ntBASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Gm37042-201ENSMUST00000193816 581 ntBASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Gm6091-201ENSMUST00000098307 165 ntBASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim29Q8R2Q0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Gm23363-201ENSMUST00000175024 79 ntBASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Gm43433-201ENSMUST00000196573 481 ntBASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim29Q8R2Q0 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Gm7561-201ENSMUST00000211203 886 ntBASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Mir339-201ENSMUST00000083659 96 ntBASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim29Q8R2Q0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim29Q8R2Q0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms