Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Mir1247-201ENSMUST00000116706 82 ntBASIC13.07□□□□□ -0.32
CopaQ8CIE6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.07□□□□□ -0.32
CopaQ8CIE6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.07□□□□□ -0.32
CopaQ8CIE6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Gm45880-201ENSMUST00000213041 853 ntBASIC13.07□□□□□ -0.32
CopaQ8CIE6 Gm16372-201ENSMUST00000073088 450 ntBASIC13.07□□□□□ -0.32
CopaQ8CIE6 Gm10268-201ENSMUST00000085340 555 ntBASIC13.07□□□□□ -0.32
CopaQ8CIE6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gm7029-201ENSMUST00000173226 450 ntBASIC13.06□□□□□ -0.32
CopaQ8CIE6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gm26927-201ENSMUST00000182385 965 ntBASIC13.06□□□□□ -0.32
CopaQ8CIE6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gm9823-201ENSMUST00000051212 327 ntBASIC13.06□□□□□ -0.32
CopaQ8CIE6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gm10146-201ENSMUST00000072739 309 ntBASIC13.06□□□□□ -0.32
CopaQ8CIE6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CopaQ8CIE6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.05□□□□□ -0.32
CopaQ8CIE6 Gm13123-201ENSMUST00000122173 492 ntBASIC13.05□□□□□ -0.32
CopaQ8CIE6 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Gm43179-201ENSMUST00000198797 275 ntBASIC13.05□□□□□ -0.32
CopaQ8CIE6 Gm6013-201ENSMUST00000212264 699 ntBASIC13.05□□□□□ -0.32
CopaQ8CIE6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms