Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ShfQ8CG80 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ShfQ8CG80 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ShfQ8CG80 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ShfQ8CG80 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
ShfQ8CG80 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ShfQ8CG80 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ShfQ8CG80 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ShfQ8CG80 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.38□□□□□ -0.59
ShfQ8CG80 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ShfQ8CG80 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ShfQ8CG80 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm7488-201ENSMUST00000117148 684 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm8213-201ENSMUST00000118191 441 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm11637-201ENSMUST00000120601 592 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm23363-201ENSMUST00000175024 79 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm45668-201ENSMUST00000211271 493 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 Gm8598-201ENSMUST00000221184 836 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
ShfQ8CG80 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ShfQ8CG80 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.37□□□□□ -0.59
ShfQ8CG80 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.37□□□□□ -0.59
ShfQ8CG80 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ShfQ8CG80 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.36□□□□□ -0.59
ShfQ8CG80 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Rubie-203ENSMUST00000227803 2430 ntBASIC11.36□□□□□ -0.59
ShfQ8CG80 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.36□□□□□ -0.59
ShfQ8CG80 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Gm15703-201ENSMUST00000120250 880 ntBASIC11.36□□□□□ -0.59
ShfQ8CG80 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Gm7063-201ENSMUST00000186840 981 ntBASIC11.36□□□□□ -0.59
ShfQ8CG80 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.36□□□□□ -0.59
ShfQ8CG80 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ShfQ8CG80 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms