Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc17Q8CE13 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc17Q8CE13 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc17Q8CE13 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Gm14726-201ENSMUST00000120623 896 ntBASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Gm45186-201ENSMUST00000206874 478 ntBASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc17Q8CE13 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc17Q8CE13 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Gm23270-201ENSMUST00000104055 131 ntBASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc17Q8CE13 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms