Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Uba3Q8C878 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Uba3Q8C878 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Uba3Q8C878 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.45□□□□□ -0.26
Uba3Q8C878 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.45□□□□□ -0.26
Uba3Q8C878 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Uba3Q8C878 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.45□□□□□ -0.26
Uba3Q8C878 Gm45880-201ENSMUST00000213041 853 ntBASIC13.45□□□□□ -0.26
Uba3Q8C878 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.45□□□□□ -0.26
Uba3Q8C878 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Uba3Q8C878 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Uba3Q8C878 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.45□□□□□ -0.26
Uba3Q8C878 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Uba3Q8C878 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Uba3Q8C878 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Uba3Q8C878 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm8738-201ENSMUST00000172606 329 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm3890-201ENSMUST00000182416 207 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm19184-201ENSMUST00000196798 928 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm18584-201ENSMUST00000203098 964 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.44□□□□□ -0.26
Uba3Q8C878 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Uba3Q8C878 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Uba3Q8C878 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Uba3Q8C878 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Uba3Q8C878 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.43□□□□□ -0.26
Uba3Q8C878 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Uba3Q8C878 Gm27572-201ENSMUST00000183702 255 ntBASIC13.43□□□□□ -0.26
Uba3Q8C878 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Uba3Q8C878 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.43□□□□□ -0.26
Uba3Q8C878 Gm38092-201ENSMUST00000195600 653 ntBASIC13.43□□□□□ -0.26
Uba3Q8C878 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.43□□□□□ -0.26
Uba3Q8C878 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.43□□□□□ -0.26
Uba3Q8C878 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Uba3Q8C878 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.43□□□□□ -0.26
Uba3Q8C878 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Uba3Q8C878 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms