Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Mir1982-201ENSMUST00000157368 74 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm18062-201ENSMUST00000208020 547 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm18055-201ENSMUST00000208254 547 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Gm8213-201ENSMUST00000118191 441 ntBASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Gm27331-201ENSMUST00000183705 60 ntBASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpsf4Q8BQZ5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cpsf4Q8BQZ5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cpsf4Q8BQZ5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Gm13226-201ENSMUST00000117838 404 ntBASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Gm16177-201ENSMUST00000120728 718 ntBASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms