Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Gm10312-201ENSMUST00000078515 489 ntBASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp6nlQ80XC3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Gm14832-201ENSMUST00000121289 322 ntBASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Gm27023-201ENSMUST00000182372 285 ntBASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Gm7003-201ENSMUST00000195089 312 ntBASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Rprl1-202ENSMUST00000198476 238 ntBASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp6nlQ80XC3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gm13296-201ENSMUST00000117854 997 ntBASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gm14999-201ENSMUST00000121039 624 ntBASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gm6963-201ENSMUST00000147879 379 ntBASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gzmn-202ENSMUST00000225535 989 ntBASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp6nlQ80XC3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.08□□□□□ -0.15
Usp6nlQ80XC3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp6nlQ80XC3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp6nlQ80XC3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp6nlQ80XC3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp6nlQ80XC3 Gm12015-201ENSMUST00000117065 843 ntBASIC14.08□□□□□ -0.16
Usp6nlQ80XC3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms