Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Gm27892-201ENSMUST00000185017 106 ntBASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Gm10146-201ENSMUST00000072739 309 ntBASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc116Q80X53 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc116Q80X53 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc116Q80X53 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc116Q80X53 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.52□□□□□ -0.4
Ccdc116Q80X53 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Gm37042-201ENSMUST00000193816 581 ntBASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Gm5035-201ENSMUST00000215581 927 ntBASIC12.52□□□□□ -0.41
Ccdc116Q80X53 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc116Q80X53 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Gm11814-201ENSMUST00000119515 929 ntBASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Gm27331-201ENSMUST00000183705 60 ntBASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.51□□□□□ -0.41
Ccdc116Q80X53 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc116Q80X53 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms