Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Gm14130-201ENSMUST00000118417 987 ntBASIC13.99□□□□□ -0.17
Ush1gQ80T11 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.99□□□□□ -0.17
Ush1gQ80T11 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Gm2260-201ENSMUST00000184965 657 ntBASIC13.99□□□□□ -0.17
Ush1gQ80T11 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Gm37986-201ENSMUST00000193285 383 ntBASIC13.99□□□□□ -0.17
Ush1gQ80T11 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.99□□□□□ -0.17
Ush1gQ80T11 Gm5904-201ENSMUST00000210286 865 ntBASIC13.99□□□□□ -0.17
Ush1gQ80T11 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.99□□□□□ -0.17
Ush1gQ80T11 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.98□□□□□ -0.17
Ush1gQ80T11 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.98□□□□□ -0.17
Ush1gQ80T11 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.98□□□□□ -0.17
Ush1gQ80T11 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.98□□□□□ -0.17
Ush1gQ80T11 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.98□□□□□ -0.17
Ush1gQ80T11 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.98□□□□□ -0.17
Ush1gQ80T11 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.98□□□□□ -0.17
Ush1gQ80T11 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.97□□□□□ -0.17
Ush1gQ80T11 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.97□□□□□ -0.17
Ush1gQ80T11 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.97□□□□□ -0.17
Ush1gQ80T11 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Gm14277-201ENSMUST00000121195 360 ntBASIC13.97□□□□□ -0.17
Ush1gQ80T11 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Gm38317-201ENSMUST00000195564 343 ntBASIC13.97□□□□□ -0.17
Ush1gQ80T11 Gm45186-201ENSMUST00000206874 478 ntBASIC13.97□□□□□ -0.17
Ush1gQ80T11 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.97□□□□□ -0.17
Ush1gQ80T11 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush1gQ80T11 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms