Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Gm14130-201ENSMUST00000118417 987 ntBASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prpf38bQ80SY5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Gm15770-201ENSMUST00000117498 584 ntBASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Gm10146-201ENSMUST00000072739 309 ntBASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Prpf38bQ80SY5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gm16372-201ENSMUST00000073088 450 ntBASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prpf38bQ80SY5 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms