Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm32025-201ENSMUST00000217960 307 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.87□□□□□ -0.51
Pif1Q80SX8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.87□□□□□ -0.51
Pif1Q80SX8 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.86□□□□□ -0.51
Pif1Q80SX8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.86□□□□□ -0.51
Pif1Q80SX8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.86□□□□□ -0.51
Pif1Q80SX8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.86□□□□□ -0.51
Pif1Q80SX8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.86□□□□□ -0.51
Pif1Q80SX8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms