Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Btrc-209ENSMUST00000224478 2194 ntBASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Gm15678-201ENSMUST00000117573 960 ntBASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Gm44124-201ENSMUST00000204159 472 ntBASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Gm9229-201ENSMUST00000222777 126 ntBASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf220Q6PDX6 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm8410-201ENSMUST00000117225 605 ntBASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Mir1897-201ENSMUST00000122581 272 ntBASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm27622-201ENSMUST00000183779 60 ntBASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm27533-201ENSMUST00000183800 152 ntBASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm5425-201ENSMUST00000214125 459 ntBASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Shd-206ENSMUST00000225145 998 ntBASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms