Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Gm11637-201ENSMUST00000120601 592 ntBASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Mir339-201ENSMUST00000083659 96 ntBASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc2Q6PDG5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Rubie-203ENSMUST00000227803 2430 ntBASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Gm14704-201ENSMUST00000120300 874 ntBASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Gm17420-201ENSMUST00000164753 153 ntBASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Gm22121-201ENSMUST00000175148 54 ntBASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Gm9899-201ENSMUST00000065519 555 ntBASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc2Q6PDG5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Gm26185-201ENSMUST00000157692 266 ntBASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Gm7029-201ENSMUST00000173226 450 ntBASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Gm26927-201ENSMUST00000182385 965 ntBASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Gm43630-201ENSMUST00000201550 776 ntBASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms