Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Gm16202-201ENSMUST00000117532 544 ntBASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Gm14350-201ENSMUST00000116642 640 ntBASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Gm5687-201ENSMUST00000118252 640 ntBASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd3Q6P9Z1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd3Q6P9Z1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Mir686-201ENSMUST00000102174 109 ntBASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Gm44069-201ENSMUST00000204898 506 ntBASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Gm44855-201ENSMUST00000205725 362 ntBASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms