Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Gm10012-201ENSMUST00000078252 192 ntBASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ParpbpQ6IRT3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ParpbpQ6IRT3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Gm29705-201ENSMUST00000212598 474 ntBASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Gm10146-201ENSMUST00000072739 309 ntBASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.02□□□□□ -0.49
ParpbpQ6IRT3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms