Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Gm12291-201ENSMUST00000121627 311 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Gm28693-202ENSMUST00000190758 331 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Gm9908-201ENSMUST00000211534 448 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Daam2-202ENSMUST00000224595 1926 ntBASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Gm11424-201ENSMUST00000121929 829 ntBASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt39Q6IFX4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Gm2495-201ENSMUST00000191160 466 ntBASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Gm18473-201ENSMUST00000220543 868 ntBASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms