Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.54□□□□□ -0.24
Scube3Q66PY1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scube3Q66PY1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Scube3Q66PY1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scube3Q66PY1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.53□□□□□ -0.24
Scube3Q66PY1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.53□□□□□ -0.24
Scube3Q66PY1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Mir1247-201ENSMUST00000116706 82 ntBASIC13.53□□□□□ -0.24
Scube3Q66PY1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.53□□□□□ -0.24
Scube3Q66PY1 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm17420-201ENSMUST00000164753 153 ntBASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scube3Q66PY1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm44683-201ENSMUST00000209088 484 ntBASIC13.53□□□□□ -0.24
Scube3Q66PY1 AC173345.3-201ENSMUST00000221245 1093 ntBASIC13.53□□□□□ -0.24
Scube3Q66PY1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.53□□□□□ -0.24
Scube3Q66PY1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scube3Q66PY1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.52□□□□□ -0.24
Scube3Q66PY1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scube3Q66PY1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Gm8312-201ENSMUST00000119380 618 ntBASIC13.52□□□□□ -0.25
Scube3Q66PY1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Gm7809-201ENSMUST00000153199 742 ntBASIC13.52□□□□□ -0.25
Scube3Q66PY1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Gm16379-201ENSMUST00000161469 348 ntBASIC13.52□□□□□ -0.25
Scube3Q66PY1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Gm8762-201ENSMUST00000193486 339 ntBASIC13.52□□□□□ -0.25
Scube3Q66PY1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Gm45880-201ENSMUST00000213041 853 ntBASIC13.52□□□□□ -0.25
Scube3Q66PY1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Gm9257-201ENSMUST00000221254 232 ntBASIC13.52□□□□□ -0.25
Scube3Q66PY1 CT025525.2-201ENSMUST00000227743 423 ntBASIC13.52□□□□□ -0.25
Scube3Q66PY1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.52□□□□□ -0.25
Scube3Q66PY1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scube3Q66PY1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scube3Q66PY1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scube3Q66PY1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.51□□□□□ -0.25
Scube3Q66PY1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scube3Q66PY1 Rubie-203ENSMUST00000227803 2430 ntBASIC13.51□□□□□ -0.25
Scube3Q66PY1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scube3Q66PY1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scube3Q66PY1 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.51□□□□□ -0.25
Scube3Q66PY1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scube3Q66PY1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scube3Q66PY1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms