Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sycp1Q62209 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sycp1Q62209 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sycp1Q62209 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sycp1Q62209 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sycp1Q62209 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sycp1Q62209 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sycp1Q62209 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.35□□□□□ -0.11
Sycp1Q62209 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.35□□□□□ -0.11
Sycp1Q62209 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm27331-201ENSMUST00000183705 60 ntBASIC14.35□□□□□ -0.11
Sycp1Q62209 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm6266-201ENSMUST00000203844 806 ntBASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm29705-201ENSMUST00000212598 474 ntBASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.35□□□□□ -0.11
Sycp1Q62209 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sycp1Q62209 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.34□□□□□ -0.11
Sycp1Q62209 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.34□□□□□ -0.11
Sycp1Q62209 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.34□□□□□ -0.11
Sycp1Q62209 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sycp1Q62209 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.34□□□□□ -0.11
Sycp1Q62209 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sycp1Q62209 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.34□□□□□ -0.11
Sycp1Q62209 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sycp1Q62209 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.34□□□□□ -0.11
Sycp1Q62209 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.34□□□□□ -0.11
Sycp1Q62209 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.34□□□□□ -0.11
Sycp1Q62209 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.34□□□□□ -0.11
Sycp1Q62209 Gm5186-201ENSMUST00000218781 920 ntBASIC14.34□□□□□ -0.11
Sycp1Q62209 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.34□□□□□ -0.11
Sycp1Q62209 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.34□□□□□ -0.11
Sycp1Q62209 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sycp1Q62209 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.34□□□□□ -0.11
Sycp1Q62209 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sycp1Q62209 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sycp1Q62209 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sycp1Q62209 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sycp1Q62209 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sycp1Q62209 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sycp1Q62209 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sycp1Q62209 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sycp1Q62209 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.33□□□□□ -0.12
Sycp1Q62209 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sycp1Q62209 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sycp1Q62209 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms