Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm16202-201ENSMUST00000117532 544 ntBASIC10.74□□□□□ -0.69
SspnQ62147 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SspnQ62147 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.74□□□□□ -0.69
SspnQ62147 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.74□□□□□ -0.69
SspnQ62147 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.74□□□□□ -0.69
SspnQ62147 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Gm15823-201ENSMUST00000064305 670 ntBASIC10.74□□□□□ -0.69
SspnQ62147 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.74□□□□□ -0.69
SspnQ62147 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SspnQ62147 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.74□□□□□ -0.69
SspnQ62147 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SspnQ62147 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SspnQ62147 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SspnQ62147 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.73□□□□□ -0.69
SspnQ62147 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Cog3-203ENSMUST00000227473 4197 ntBASIC10.73□□□□□ -0.69
SspnQ62147 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.73□□□□□ -0.69
SspnQ62147 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.73□□□□□ -0.69
SspnQ62147 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
SspnQ62147 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.73□□□□□ -0.69
SspnQ62147 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.73□□□□□ -0.69
SspnQ62147 Gm6458-201ENSMUST00000211573 635 ntBASIC10.73□□□□□ -0.69
SspnQ62147 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.73□□□□□ -0.69
SspnQ62147 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.73□□□□□ -0.69
SspnQ62147 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.73□□□□□ -0.69
SspnQ62147 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.73□□□□□ -0.69
SspnQ62147 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
SspnQ62147 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SspnQ62147 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SspnQ62147 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.72□□□□□ -0.69
SspnQ62147 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SspnQ62147 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SspnQ62147 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SspnQ62147 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
SspnQ62147 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.72□□□□□ -0.69
SspnQ62147 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms