Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Foxc1Q61572 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm45210-201ENSMUST00000206401 1577 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm9506-201ENSMUST00000118516 320 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm15429-201ENSMUST00000151268 798 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm27486-201ENSMUST00000184923 80 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.63□□□□□ -0.87
Foxc1Q61572 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm6983-201ENSMUST00000214912 628 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm5035-201ENSMUST00000215581 927 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.63□□□□□ -0.87
Foxc1Q61572 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Foxc1Q61572 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Foxc1Q61572 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Nudt18-202ENSMUST00000228554 3619 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm45114-201ENSMUST00000208280 1349 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms