Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Rprl2-201ENSMUST00000157150 290 ntBASIC15.33■□□□□ 0.04
Mre11Q61216 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.33■□□□□ 0.04
Mre11Q61216 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.33■□□□□ 0.04
Mre11Q61216 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Mre11Q61216 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.33■□□□□ 0.04
Mre11Q61216 Gm18363-201ENSMUST00000221671 730 ntBASIC15.33■□□□□ 0.04
Mre11Q61216 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.33■□□□□ 0.04
Mre11Q61216 Gm9229-201ENSMUST00000222777 126 ntBASIC15.33■□□□□ 0.04
Mre11Q61216 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.33■□□□□ 0.04
Mre11Q61216 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Mre11Q61216 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mre11Q61216 Gm2128-201ENSMUST00000108009 2560 ntBASIC15.32■□□□□ 0.04
Mre11Q61216 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.32■□□□□ 0.04
Mre11Q61216 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Mre11Q61216 Gm15653-201ENSMUST00000119247 907 ntBASIC15.32■□□□□ 0.04
Mre11Q61216 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC15.32■□□□□ 0.04
Mre11Q61216 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC15.32■□□□□ 0.04
Mre11Q61216 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.32■□□□□ 0.04
Mre11Q61216 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.32■□□□□ 0.04
Mre11Q61216 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Mre11Q61216 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Mre11Q61216 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.32■□□□□ 0.04
Mre11Q61216 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mre11Q61216 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Mre11Q61216 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.31■□□□□ 0.04
Mre11Q61216 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Mre11Q61216 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.31■□□□□ 0.04
Mre11Q61216 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.31■□□□□ 0.04
Mre11Q61216 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.31■□□□□ 0.04
Mre11Q61216 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Gm6736-201ENSMUST00000166583 948 ntBASIC15.31■□□□□ 0.04
Mre11Q61216 Gm42599-201ENSMUST00000201308 469 ntBASIC15.31■□□□□ 0.04
Mre11Q61216 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.31■□□□□ 0.04
Mre11Q61216 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC15.31■□□□□ 0.04
Mre11Q61216 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.31■□□□□ 0.04
Mre11Q61216 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Mre11Q61216 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.31■□□□□ 0.04
Mre11Q61216 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mre11Q61216 Gm5859-201ENSMUST00000165401 2324 ntBASIC15.31■□□□□ 0.04
Mre11Q61216 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Mre11Q61216 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms