Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ClpbQ60649 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.29□□□□□ -0.44
ClpbQ60649 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
ClpbQ60649 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.29□□□□□ -0.44
ClpbQ60649 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpbQ60649 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.28□□□□□ -0.44
ClpbQ60649 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ClpbQ60649 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.28□□□□□ -0.44
ClpbQ60649 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.28□□□□□ -0.44
ClpbQ60649 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ClpbQ60649 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ClpbQ60649 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.28□□□□□ -0.44
ClpbQ60649 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ClpbQ60649 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.28□□□□□ -0.44
ClpbQ60649 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Gm1335-201ENSMUST00000121653 386 ntBASIC12.28□□□□□ -0.44
ClpbQ60649 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.28□□□□□ -0.44
ClpbQ60649 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ClpbQ60649 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
ClpbQ60649 Gm17420-201ENSMUST00000164753 153 ntBASIC12.28□□□□□ -0.44
ClpbQ60649 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.28□□□□□ -0.44
ClpbQ60649 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.28□□□□□ -0.44
ClpbQ60649 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Gm10146-201ENSMUST00000072739 309 ntBASIC12.28□□□□□ -0.44
ClpbQ60649 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ClpbQ60649 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ClpbQ60649 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.28□□□□□ -0.44
ClpbQ60649 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpbQ60649 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpbQ60649 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpbQ60649 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpbQ60649 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpbQ60649 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpbQ60649 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
ClpbQ60649 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ClpbQ60649 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
ClpbQ60649 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpbQ60649 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpbQ60649 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.27□□□□□ -0.45
ClpbQ60649 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
ClpbQ60649 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.27□□□□□ -0.45
ClpbQ60649 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ClpbQ60649 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.27□□□□□ -0.45
ClpbQ60649 Gm13123-201ENSMUST00000122173 492 ntBASIC12.27□□□□□ -0.45
ClpbQ60649 Gm2231-201ENSMUST00000125661 612 ntBASIC12.27□□□□□ -0.45
ClpbQ60649 Gm8062-201ENSMUST00000139696 444 ntBASIC12.27□□□□□ -0.45
ClpbQ60649 Gm37424-201ENSMUST00000191727 561 ntBASIC12.27□□□□□ -0.45
ClpbQ60649 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.27□□□□□ -0.45
ClpbQ60649 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.27□□□□□ -0.45
ClpbQ60649 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.27□□□□□ -0.45
ClpbQ60649 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
ClpbQ60649 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.27□□□□□ -0.45
ClpbQ60649 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.27□□□□□ -0.45
ClpbQ60649 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpbQ60649 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.26□□□□□ -0.45
ClpbQ60649 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms