Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.99□□□□□ -0.49
Trim40Q3UWA4 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.99□□□□□ -0.49
Trim40Q3UWA4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Gm5161-201ENSMUST00000075243 853 ntBASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim40Q3UWA4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Gm43575-201ENSMUST00000196420 516 ntBASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim40Q3UWA4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Gm37935-201ENSMUST00000192012 982 ntBASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Gm38294-201ENSMUST00000192831 381 ntBASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim40Q3UWA4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms