Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm23769-201ENSMUST00000104441 121 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm2474-201ENSMUST00000195162 559 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm5455-201ENSMUST00000058710 715 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm14892-201ENSMUST00000117636 267 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm11836-201ENSMUST00000121022 441 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Mir7088-201ENSMUST00000184227 86 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm37458-201ENSMUST00000194055 410 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm18968-201ENSMUST00000221319 862 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm22661-201ENSMUST00000104192 132 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm23400-201ENSMUST00000174994 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm26463-201ENSMUST00000175065 101 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm24332-201ENSMUST00000175102 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm25959-201ENSMUST00000175112 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm22475-201ENSMUST00000175169 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm22903-201ENSMUST00000175193 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm25070-201ENSMUST00000175237 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm24159-201ENSMUST00000175264 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm25299-201ENSMUST00000175283 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm23798-201ENSMUST00000175560 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm23802-201ENSMUST00000175565 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm25708-201ENSMUST00000177687 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm24370-201ENSMUST00000178007 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm23049-201ENSMUST00000178068 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm28019-201ENSMUST00000178138 101 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm25571-201ENSMUST00000178322 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm25355-201ENSMUST00000178456 101 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm24975-201ENSMUST00000178492 101 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm23189-201ENSMUST00000178954 102 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm25100-201ENSMUST00000179750 101 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm23064-201ENSMUST00000179866 101 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm27530-201ENSMUST00000184096 98 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.35□□□□□ -0.59
Chd8Q09XV5 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.35□□□□□ -0.59
Chd8Q09XV5 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd8Q09XV5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Gm12663-201ENSMUST00000118481 958 ntBASIC11.34□□□□□ -0.59
Chd8Q09XV5 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Gm18256-201ENSMUST00000209087 907 ntBASIC11.34□□□□□ -0.59
Chd8Q09XV5 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.34□□□□□ -0.59
Chd8Q09XV5 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms