Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.96□□□□□ -0.33
Ebf1Q07802 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ebf1Q07802 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.96□□□□□ -0.34
Ebf1Q07802 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.96□□□□□ -0.34
Ebf1Q07802 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ebf1Q07802 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf1Q07802 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf1Q07802 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.95□□□□□ -0.34
Ebf1Q07802 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Gm24990-201ENSMUST00000157406 323 ntBASIC12.95□□□□□ -0.34
Ebf1Q07802 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.95□□□□□ -0.34
Ebf1Q07802 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Gm6458-201ENSMUST00000211573 635 ntBASIC12.95□□□□□ -0.34
Ebf1Q07802 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.95□□□□□ -0.34
Ebf1Q07802 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.95□□□□□ -0.34
Ebf1Q07802 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf1Q07802 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ebf1Q07802 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ebf1Q07802 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Gm4909-201ENSMUST00000118749 794 ntBASIC12.94□□□□□ -0.34
Ebf1Q07802 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.94□□□□□ -0.34
Ebf1Q07802 Gm12502-201ENSMUST00000120197 444 ntBASIC12.94□□□□□ -0.34
Ebf1Q07802 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ebf1Q07802 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.94□□□□□ -0.34
Ebf1Q07802 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ebf1Q07802 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.94□□□□□ -0.34
Ebf1Q07802 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms