Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC8.41□□□□□ -1.06
PrkdcP97313 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC8.41□□□□□ -1.06
PrkdcP97313 Ap5m1-205ENSMUST00000227431 3757 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC8.41□□□□□ -1.06
PrkdcP97313 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PrkdcP97313 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
PrkdcP97313 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
PrkdcP97313 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC8.41□□□□□ -1.06
PrkdcP97313 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC8.41□□□□□ -1.06
PrkdcP97313 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm8436-201ENSMUST00000210152 1080 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm5749-201ENSMUST00000210673 1090 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC8.41□□□□□ -1.06
PrkdcP97313 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm18294-201ENSMUST00000176980 1748 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm8798-201ENSMUST00000211877 1661 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
PrkdcP97313 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm8899-201ENSMUST00000214635 1332 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm13171-201ENSMUST00000117233 391 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm9625-201ENSMUST00000180422 955 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm5210-201ENSMUST00000182150 1010 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm38007-201ENSMUST00000192187 313 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
PrkdcP97313 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC8.41□□□□□ -1.06
PrkdcP97313 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PrkdcP97313 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 AC122314.1-201ENSMUST00000223056 2239 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 AC154671.1-201ENSMUST00000228617 1578 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC8.4□□□□□ -1.06
PrkdcP97313 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC8.4□□□□□ -1.06
PrkdcP97313 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC8.4□□□□□ -1.06
PrkdcP97313 Gm8181-201ENSMUST00000062242 669 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Gm5449-201ENSMUST00000081132 357 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Gm13394-201ENSMUST00000121658 1000 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Gm4310-201ENSMUST00000177847 889 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC8.4□□□□□ -1.06
PrkdcP97313 Gm18552-201ENSMUST00000187425 538 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC8.4□□□□□ -1.06
PrkdcP97313 AC154436.1-201ENSMUST00000227272 782 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Gm5451-201ENSMUST00000080545 579 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Gm23105-201ENSMUST00000083719 134 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC8.4□□□□□ -1.06
PrkdcP97313 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
PrkdcP97313 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Gm11960-202ENSMUST00000181063 2858 ntBASIC8.4□□□□□ -1.06
PrkdcP97313 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms