Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim43bP86448 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim43bP86448 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.17□□□□□ -0.3
Trim43bP86448 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim43bP86448 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim43bP86448 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim43bP86448 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim43bP86448 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim43bP86448 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim43bP86448 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim43bP86448 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim43bP86448 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43bP86448 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim43bP86448 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43bP86448 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim43bP86448 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43bP86448 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Trim43bP86448 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.16□□□□□ -0.3
Trim43bP86448 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim43bP86448 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43bP86448 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim43bP86448 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim43bP86448 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim43bP86448 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm12403-201ENSMUST00000121384 959 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Gm6266-201ENSMUST00000203844 806 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trim43bP86448 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Gm25857-201ENSMUST00000082788 129 ntBASIC13.15□□□□□ -0.3
Trim43bP86448 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms