Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.72□□□□□ -0.69
SgcaP82350 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.72□□□□□ -0.69
SgcaP82350 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Daam2-202ENSMUST00000224595 1926 ntBASIC10.72□□□□□ -0.69
SgcaP82350 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SgcaP82350 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.71□□□□□ -0.69
SgcaP82350 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
SgcaP82350 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.71□□□□□ -0.69
SgcaP82350 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Gm27772-201ENSMUST00000184900 187 ntBASIC10.71□□□□□ -0.69
SgcaP82350 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.71□□□□□ -0.69
SgcaP82350 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.71□□□□□ -0.69
SgcaP82350 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
SgcaP82350 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcaP82350 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcaP82350 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
SgcaP82350 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SgcaP82350 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SgcaP82350 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SgcaP82350 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SgcaP82350 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.71□□□□□ -0.7
SgcaP82350 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SgcaP82350 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
SgcaP82350 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
SgcaP82350 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
SgcaP82350 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.71□□□□□ -0.7
SgcaP82350 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.7□□□□□ -0.7
SgcaP82350 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SgcaP82350 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SgcaP82350 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
SgcaP82350 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcaP82350 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms