Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.6□□□□□ -0.39
Shox2P70390 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shox2P70390 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shox2P70390 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.6□□□□□ -0.39
Shox2P70390 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.6□□□□□ -0.39
Shox2P70390 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.59□□□□□ -0.39
Shox2P70390 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Shox2P70390 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.59□□□□□ -0.39
Shox2P70390 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Shox2P70390 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.59□□□□□ -0.39
Shox2P70390 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.59□□□□□ -0.39
Shox2P70390 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.59□□□□□ -0.39
Shox2P70390 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shox2P70390 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shox2P70390 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shox2P70390 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Shox2P70390 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.58□□□□□ -0.4
Shox2P70390 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.58□□□□□ -0.4
Shox2P70390 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Shox2P70390 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.58□□□□□ -0.4
Shox2P70390 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Gm27533-201ENSMUST00000183800 152 ntBASIC12.58□□□□□ -0.4
Shox2P70390 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.58□□□□□ -0.4
Shox2P70390 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.58□□□□□ -0.4
Shox2P70390 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.58□□□□□ -0.4
Shox2P70390 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.58□□□□□ -0.4
Shox2P70390 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.58□□□□□ -0.4
Shox2P70390 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Shox2P70390 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Shox2P70390 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shox2P70390 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Shox2P70390 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.57□□□□□ -0.4
Shox2P70390 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms