Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Nup43P59235 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.07□□□□□ -0.48
Nup43P59235 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.07□□□□□ -0.48
Nup43P59235 Gm11591-201ENSMUST00000120063 702 ntBASIC12.07□□□□□ -0.48
Nup43P59235 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.07□□□□□ -0.48
Nup43P59235 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Nup43P59235 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Gm16379-201ENSMUST00000161469 348 ntBASIC12.07□□□□□ -0.48
Nup43P59235 Gm6222-202ENSMUST00000182143 629 ntBASIC12.07□□□□□ -0.48
Nup43P59235 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.07□□□□□ -0.48
Nup43P59235 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.07□□□□□ -0.48
Nup43P59235 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.07□□□□□ -0.48
Nup43P59235 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Gm8762-201ENSMUST00000193486 339 ntBASIC12.07□□□□□ -0.48
Nup43P59235 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.07□□□□□ -0.48
Nup43P59235 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Nup43P59235 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.07□□□□□ -0.48
Nup43P59235 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.07□□□□□ -0.48
Nup43P59235 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nup43P59235 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nup43P59235 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.07□□□□□ -0.48
Nup43P59235 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.07□□□□□ -0.48
Nup43P59235 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Nup43P59235 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup43P59235 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Nup43P59235 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.06□□□□□ -0.48
Nup43P59235 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup43P59235 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Gm12742-201ENSMUST00000117326 410 ntBASIC12.06□□□□□ -0.48
Nup43P59235 Gm12957-201ENSMUST00000117835 377 ntBASIC12.06□□□□□ -0.48
Nup43P59235 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nup43P59235 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nup43P59235 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup43P59235 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup43P59235 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Gm37424-201ENSMUST00000191727 561 ntBASIC12.06□□□□□ -0.48
Nup43P59235 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup43P59235 Gm37008-201ENSMUST00000195712 319 ntBASIC12.06□□□□□ -0.48
Nup43P59235 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.06□□□□□ -0.48
Nup43P59235 Gm18584-201ENSMUST00000203098 964 ntBASIC12.06□□□□□ -0.48
Nup43P59235 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.06□□□□□ -0.48
Nup43P59235 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nup43P59235 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.06□□□□□ -0.48
Nup43P59235 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup43P59235 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Gm23931-201ENSMUST00000103842 109 ntBASIC12.05□□□□□ -0.48
Nup43P59235 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.05□□□□□ -0.48
Nup43P59235 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.05□□□□□ -0.48
Nup43P59235 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.05□□□□□ -0.48
Nup43P59235 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nup43P59235 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms