Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SmoP56726 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
SmoP56726 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SmoP56726 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.83□□□□□ -0.36
SmoP56726 Gm13875-201ENSMUST00000120162 282 ntBASIC12.83□□□□□ -0.36
SmoP56726 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.83□□□□□ -0.36
SmoP56726 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.83□□□□□ -0.36
SmoP56726 Gm8018-201ENSMUST00000173536 789 ntBASIC12.83□□□□□ -0.36
SmoP56726 Gm2546-201ENSMUST00000182630 991 ntBASIC12.83□□□□□ -0.36
SmoP56726 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Gm21769-201ENSMUST00000211922 111 ntBASIC12.83□□□□□ -0.36
SmoP56726 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.83□□□□□ -0.36
SmoP56726 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SmoP56726 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SmoP56726 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.83□□□□□ -0.36
SmoP56726 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.82□□□□□ -0.36
SmoP56726 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SmoP56726 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SmoP56726 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Gm12058-201ENSMUST00000118614 437 ntBASIC12.82□□□□□ -0.36
SmoP56726 Gm13350-201ENSMUST00000120519 479 ntBASIC12.82□□□□□ -0.36
SmoP56726 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.82□□□□□ -0.36
SmoP56726 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.82□□□□□ -0.36
SmoP56726 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.82□□□□□ -0.36
SmoP56726 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Gm7584-201ENSMUST00000175829 940 ntBASIC12.82□□□□□ -0.36
SmoP56726 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Gm5950-201ENSMUST00000213337 772 ntBASIC12.82□□□□□ -0.36
SmoP56726 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.82□□□□□ -0.36
SmoP56726 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.82□□□□□ -0.36
SmoP56726 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.82□□□□□ -0.36
SmoP56726 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SmoP56726 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.82□□□□□ -0.36
SmoP56726 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SmoP56726 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SmoP56726 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SmoP56726 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.81□□□□□ -0.36
SmoP56726 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SmoP56726 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SmoP56726 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SmoP56726 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SmoP56726 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms