Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.63□□□□□ -0.39
Pdx1P52946 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm14921-201ENSMUST00000118643 908 ntBASIC12.63□□□□□ -0.39
Pdx1P52946 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.63□□□□□ -0.39
Pdx1P52946 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.63□□□□□ -0.39
Pdx1P52946 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm38092-201ENSMUST00000195600 653 ntBASIC12.63□□□□□ -0.39
Pdx1P52946 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.63□□□□□ -0.39
Pdx1P52946 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pdx1P52946 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pdx1P52946 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.63□□□□□ -0.39
Pdx1P52946 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Pdx1P52946 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pdx1P52946 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdx1P52946 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.62□□□□□ -0.39
Pdx1P52946 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pdx1P52946 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.62□□□□□ -0.39
Pdx1P52946 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pdx1P52946 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.62□□□□□ -0.39
Pdx1P52946 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pdx1P52946 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.62□□□□□ -0.39
Pdx1P52946 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.62□□□□□ -0.39
Pdx1P52946 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.62□□□□□ -0.39
Pdx1P52946 Gm7809-201ENSMUST00000153199 742 ntBASIC12.62□□□□□ -0.39
Pdx1P52946 Snora78-201ENSMUST00000158630 128 ntBASIC12.62□□□□□ -0.39
Pdx1P52946 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Pdx1P52946 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.62□□□□□ -0.39
Pdx1P52946 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pdx1P52946 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pdx1P52946 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pdx1P52946 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pdx1P52946 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.62□□□□□ -0.39
Pdx1P52946 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pdx1P52946 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pdx1P52946 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.61□□□□□ -0.39
Pdx1P52946 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.61□□□□□ -0.39
Pdx1P52946 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pdx1P52946 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pdx1P52946 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pdx1P52946 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Gm22018-201ENSMUST00000104357 131 ntBASIC12.61□□□□□ -0.39
Pdx1P52946 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.61□□□□□ -0.39
Pdx1P52946 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms