Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Gm44364-201ENSMUST00000198368 141 ntBASIC13.5□□□□□ -0.25
Shmt1P50431 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Shmt1P50431 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.5□□□□□ -0.25
Shmt1P50431 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.5□□□□□ -0.25
Shmt1P50431 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Shmt1P50431 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Shmt1P50431 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.5□□□□□ -0.25
Shmt1P50431 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Shmt1P50431 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Shmt1P50431 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Shmt1P50431 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.49□□□□□ -0.25
Shmt1P50431 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Shmt1P50431 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.49□□□□□ -0.25
Shmt1P50431 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Shmt1P50431 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.49□□□□□ -0.25
Shmt1P50431 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.49□□□□□ -0.25
Shmt1P50431 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.49□□□□□ -0.25
Shmt1P50431 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.49□□□□□ -0.25
Shmt1P50431 Gm43758-201ENSMUST00000199500 367 ntBASIC13.49□□□□□ -0.25
Shmt1P50431 Cts7-204ENSMUST00000225321 1257 ntBASIC13.49□□□□□ -0.25
Shmt1P50431 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.49□□□□□ -0.25
Shmt1P50431 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Shmt1P50431 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Shmt1P50431 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shmt1P50431 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.48□□□□□ -0.25
Shmt1P50431 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Shmt1P50431 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Shmt1P50431 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Shmt1P50431 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Gm12241-201ENSMUST00000118330 726 ntBASIC13.48□□□□□ -0.25
Shmt1P50431 Gm4986-201ENSMUST00000119731 549 ntBASIC13.48□□□□□ -0.25
Shmt1P50431 Gm13875-201ENSMUST00000120162 282 ntBASIC13.48□□□□□ -0.25
Shmt1P50431 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Shmt1P50431 Gm38241-201ENSMUST00000192641 898 ntBASIC13.48□□□□□ -0.25
Shmt1P50431 Gm6621-201ENSMUST00000193251 772 ntBASIC13.48□□□□□ -0.25
Shmt1P50431 Gm45865-201ENSMUST00000211815 945 ntBASIC13.48□□□□□ -0.25
Shmt1P50431 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.48□□□□□ -0.25
Shmt1P50431 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.48□□□□□ -0.25
Shmt1P50431 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Shmt1P50431 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.48□□□□□ -0.25
Shmt1P50431 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.48□□□□□ -0.25
Shmt1P50431 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shmt1P50431 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.47□□□□□ -0.25
Shmt1P50431 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.47□□□□□ -0.25
Shmt1P50431 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms