Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.56□□□□□ -0.56
Rfx3P48381 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rfx3P48381 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.56□□□□□ -0.56
Rfx3P48381 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.56□□□□□ -0.56
Rfx3P48381 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Gm18018-201ENSMUST00000198273 408 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rfx3P48381 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rfx3P48381 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rfx3P48381 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rfx3P48381 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.55□□□□□ -0.56
Rfx3P48381 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.55□□□□□ -0.56
Rfx3P48381 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.55□□□□□ -0.56
Rfx3P48381 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rfx3P48381 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.55□□□□□ -0.56
Rfx3P48381 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.55□□□□□ -0.56
Rfx3P48381 Gm5687-201ENSMUST00000118252 640 ntBASIC11.55□□□□□ -0.56
Rfx3P48381 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.55□□□□□ -0.56
Rfx3P48381 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.55□□□□□ -0.56
Rfx3P48381 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Rfx3P48381 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.55□□□□□ -0.56
Rfx3P48381 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.55□□□□□ -0.56
Rfx3P48381 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Gm16372-201ENSMUST00000073088 450 ntBASIC11.55□□□□□ -0.56
Rfx3P48381 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.55□□□□□ -0.56
Rfx3P48381 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rfx3P48381 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.55□□□□□ -0.56
Rfx3P48381 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rfx3P48381 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rfx3P48381 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.54□□□□□ -0.56
Rfx3P48381 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.54□□□□□ -0.56
Rfx3P48381 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms