Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HttP42859 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HttP42859 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC13.18□□□□□ -0.3
HttP42859 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.18□□□□□ -0.3
HttP42859 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HttP42859 Gm42816-201ENSMUST00000198433 325 ntBASIC13.18□□□□□ -0.3
HttP42859 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HttP42859 BC106175-202ENSMUST00000219344 1213 ntBASIC13.18□□□□□ -0.3
HttP42859 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HttP42859 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HttP42859 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.18□□□□□ -0.3
HttP42859 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HttP42859 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HttP42859 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
HttP42859 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.17□□□□□ -0.3
HttP42859 Gm8342-201ENSMUST00000209839 757 ntBASIC13.17□□□□□ -0.3
HttP42859 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.17□□□□□ -0.3
HttP42859 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.17□□□□□ -0.3
HttP42859 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HttP42859 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HttP42859 Gm3329-201ENSMUST00000159873 556 ntBASIC13.17□□□□□ -0.3
HttP42859 Gm17192-201ENSMUST00000169031 511 ntBASIC13.17□□□□□ -0.3
HttP42859 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.17□□□□□ -0.3
HttP42859 Gm6644-201ENSMUST00000186507 951 ntBASIC13.17□□□□□ -0.3
HttP42859 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HttP42859 Gm17214-201ENSMUST00000164501 541 ntBASIC13.17□□□□□ -0.3
HttP42859 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HttP42859 Gm8451-201ENSMUST00000170338 447 ntBASIC13.17□□□□□ -0.3
HttP42859 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HttP42859 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.17□□□□□ -0.3
HttP42859 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.17□□□□□ -0.3
HttP42859 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.17□□□□□ -0.3
HttP42859 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Gm7536-201ENSMUST00000077389 444 ntBASIC13.17□□□□□ -0.3
HttP42859 Gm5453-201ENSMUST00000080866 447 ntBASIC13.17□□□□□ -0.3
HttP42859 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
HttP42859 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC13.16□□□□□ -0.3
HttP42859 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.16□□□□□ -0.3
HttP42859 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HttP42859 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.16□□□□□ -0.3
HttP42859 Gm12906-201ENSMUST00000154610 441 ntBASIC13.16□□□□□ -0.3
HttP42859 Gm29499-201ENSMUST00000189151 486 ntBASIC13.16□□□□□ -0.3
HttP42859 Gm28329-201ENSMUST00000191208 689 ntBASIC13.16□□□□□ -0.3
HttP42859 Gm29171-201ENSMUST00000191397 486 ntBASIC13.16□□□□□ -0.3
HttP42859 Gm35960-201ENSMUST00000202712 767 ntBASIC13.16□□□□□ -0.3
HttP42859 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.16□□□□□ -0.3
HttP42859 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.16□□□□□ -0.3
HttP42859 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.16□□□□□ -0.3
HttP42859 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HttP42859 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.15□□□□□ -0.3
HttP42859 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.15□□□□□ -0.3
HttP42859 Gm37197-201ENSMUST00000195607 401 ntBASIC13.15□□□□□ -0.3
HttP42859 Gm43969-201ENSMUST00000204833 535 ntBASIC13.15□□□□□ -0.3
HttP42859 Gm18561-201ENSMUST00000206027 804 ntBASIC13.15□□□□□ -0.3
HttP42859 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.15□□□□□ -0.3
HttP42859 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms