Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx1-2P42580 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx1-2P42580 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Nkx1-2P42580 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Nkx1-2P42580 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx1-2P42580 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx1-2P42580 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx1-2P42580 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx1-2P42580 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Nkx1-2P42580 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
Nkx1-2P42580 Map1b-203ENSMUST00000223725 2669 ntBASIC15.71■□□□□ 0.1
Nkx1-2P42580 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Gm44086-201ENSMUST00000203251 2349 ntBASIC15.7■□□□□ 0.1
Nkx1-2P42580 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Gm13612-201ENSMUST00000119276 390 ntBASIC15.7■□□□□ 0.1
Nkx1-2P42580 Gm14928-201ENSMUST00000120198 477 ntBASIC15.7■□□□□ 0.1
Nkx1-2P42580 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx1-2P42580 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Gm6458-201ENSMUST00000211573 635 ntBASIC15.7■□□□□ 0.1
Nkx1-2P42580 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.7■□□□□ 0.1
Nkx1-2P42580 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx1-2P42580 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.69■□□□□ 0.1
Nkx1-2P42580 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Gm28693-202ENSMUST00000190758 331 ntBASIC15.69■□□□□ 0.1
Nkx1-2P42580 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Gm16372-201ENSMUST00000073088 450 ntBASIC15.69■□□□□ 0.1
Nkx1-2P42580 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx1-2P42580 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Gm12091-201ENSMUST00000146791 830 ntBASIC15.68■□□□□ 0.1
Nkx1-2P42580 Gm23984-201ENSMUST00000157139 203 ntBASIC15.68■□□□□ 0.1
Nkx1-2P42580 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Proscos-202ENSMUST00000178990 666 ntBASIC15.68■□□□□ 0.1
Nkx1-2P42580 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Gm7287-201ENSMUST00000205267 602 ntBASIC15.68■□□□□ 0.1
Nkx1-2P42580 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Gm45384-201ENSMUST00000210451 277 ntBASIC15.68■□□□□ 0.1
Nkx1-2P42580 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx1-2P42580 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.67■□□□□ 0.1
Nkx1-2P42580 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms