Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox6P40645 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.02□□□□□ -0.48
Sox6P40645 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox6P40645 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox6P40645 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Sox6P40645 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox6P40645 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox6P40645 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sox6P40645 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox6P40645 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Sox6P40645 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Sox6P40645 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Gm9794-201ENSMUST00000202370 423 ntBASIC12.02□□□□□ -0.49
Sox6P40645 Gm9908-201ENSMUST00000211534 448 ntBASIC12.02□□□□□ -0.49
Sox6P40645 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.02□□□□□ -0.49
Sox6P40645 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.02□□□□□ -0.49
Sox6P40645 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sox6P40645 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox6P40645 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox6P40645 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sox6P40645 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox6P40645 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox6P40645 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox6P40645 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.01□□□□□ -0.49
Sox6P40645 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Gm15678-201ENSMUST00000117573 960 ntBASIC12.01□□□□□ -0.49
Sox6P40645 Gm13689-201ENSMUST00000119360 685 ntBASIC12.01□□□□□ -0.49
Sox6P40645 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Sox6P40645 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox6P40645 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox6P40645 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox6P40645 Gm28911-201ENSMUST00000188837 117 ntBASIC12.01□□□□□ -0.49
Sox6P40645 Gm44397-201ENSMUST00000195950 113 ntBASIC12.01□□□□□ -0.49
Sox6P40645 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox6P40645 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Sox6P40645 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox6P40645 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Sox6P40645 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.01□□□□□ -0.49
Sox6P40645 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox6P40645 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox6P40645 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox6P40645 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Gm44401-201ENSMUST00000204462 2375 ntBASIC12□□□□□ -0.49
Sox6P40645 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox6P40645 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Sox6P40645 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Gm38187-201ENSMUST00000195609 4709 ntBASIC12□□□□□ -0.49
Sox6P40645 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12□□□□□ -0.49
Sox6P40645 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox6P40645 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms