Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 AC122314.1-201ENSMUST00000223056 2239 ntBASIC18.7■□□□□ 0.58
Chd1P40201 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Chd1P40201 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Chd1P40201 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Gm13117-201ENSMUST00000120894 691 ntBASIC18.69■□□□□ 0.58
Chd1P40201 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC18.69■□□□□ 0.58
Chd1P40201 Gm30671-201ENSMUST00000214898 318 ntBASIC18.69■□□□□ 0.58
Chd1P40201 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Chd1P40201 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Zfp125-201ENSMUST00000079237 2488 ntBASIC18.69■□□□□ 0.58
Chd1P40201 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1P40201 Gm7150-201ENSMUST00000122032 981 ntBASIC18.69■□□□□ 0.58
Chd1P40201 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC18.69■□□□□ 0.58
Chd1P40201 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC18.69■□□□□ 0.58
Chd1P40201 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC18.69■□□□□ 0.58
Chd1P40201 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC18.69■□□□□ 0.58
Chd1P40201 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC18.69■□□□□ 0.58
Chd1P40201 Gm18801-201ENSMUST00000186616 536 ntBASIC18.69■□□□□ 0.58
Chd1P40201 AC164087.2-201ENSMUST00000216206 1072 ntBASIC18.69■□□□□ 0.58
Chd1P40201 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC18.69■□□□□ 0.58
Chd1P40201 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Chd1P40201 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Chd1P40201 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC18.68■□□□□ 0.58
Chd1P40201 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Chd1P40201 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Chd1P40201 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Chd1P40201 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC18.68■□□□□ 0.58
Chd1P40201 Gm7082-201ENSMUST00000209880 969 ntBASIC18.68■□□□□ 0.58
Chd1P40201 CT030652.1-201ENSMUST00000227377 1235 ntBASIC18.68■□□□□ 0.58
Chd1P40201 Gm5513-201ENSMUST00000072982 1218 ntBASIC18.68■□□□□ 0.58
Chd1P40201 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC18.68■□□□□ 0.58
Chd1P40201 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1P40201 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Chd1P40201 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chd1P40201 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chd1P40201 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Gm12791-201ENSMUST00000120788 655 ntBASIC18.67■□□□□ 0.58
Chd1P40201 Gm19015-201ENSMUST00000184002 1189 ntBASIC18.67■□□□□ 0.58
Chd1P40201 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Chd1P40201 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC18.67■□□□□ 0.58
Chd1P40201 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Chd1P40201 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Chd1P40201 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1P40201 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms