Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HmgclP38060 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.59□□□□□ -0.39
HmgclP38060 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.59□□□□□ -0.39
HmgclP38060 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HmgclP38060 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
HmgclP38060 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HmgclP38060 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.59□□□□□ -0.39
HmgclP38060 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.59□□□□□ -0.39
HmgclP38060 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.59□□□□□ -0.39
HmgclP38060 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.59□□□□□ -0.39
HmgclP38060 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HmgclP38060 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.58□□□□□ -0.4
HmgclP38060 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.58□□□□□ -0.4
HmgclP38060 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.58□□□□□ -0.4
HmgclP38060 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HmgclP38060 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HmgclP38060 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Gm11591-201ENSMUST00000120063 702 ntBASIC12.58□□□□□ -0.4
HmgclP38060 Gm15703-201ENSMUST00000120250 880 ntBASIC12.58□□□□□ -0.4
HmgclP38060 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HmgclP38060 Gm25927-201ENSMUST00000175058 117 ntBASIC12.58□□□□□ -0.4
HmgclP38060 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.58□□□□□ -0.4
HmgclP38060 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.58□□□□□ -0.4
HmgclP38060 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.58□□□□□ -0.4
HmgclP38060 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
HmgclP38060 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
HmgclP38060 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HmgclP38060 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.57□□□□□ -0.4
HmgclP38060 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.57□□□□□ -0.4
HmgclP38060 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HmgclP38060 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Gm11425-201ENSMUST00000119608 498 ntBASIC12.57□□□□□ -0.4
HmgclP38060 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HmgclP38060 Mir1982-201ENSMUST00000157368 74 ntBASIC12.57□□□□□ -0.4
HmgclP38060 Gm25261-201ENSMUST00000157416 134 ntBASIC12.57□□□□□ -0.4
HmgclP38060 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HmgclP38060 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.57□□□□□ -0.4
HmgclP38060 Gm18584-201ENSMUST00000203098 964 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms