Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LdlrP35951 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.73□□□□□ -0.37
LdlrP35951 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.73□□□□□ -0.37
LdlrP35951 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.73□□□□□ -0.37
LdlrP35951 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.73□□□□□ -0.37
LdlrP35951 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.73□□□□□ -0.37
LdlrP35951 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LdlrP35951 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
LdlrP35951 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LdlrP35951 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Gm11978-201ENSMUST00000122315 466 ntBASIC12.73□□□□□ -0.37
LdlrP35951 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.73□□□□□ -0.37
LdlrP35951 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LdlrP35951 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Gm42550-201ENSMUST00000201553 960 ntBASIC12.73□□□□□ -0.37
LdlrP35951 Gm7287-201ENSMUST00000205267 602 ntBASIC12.73□□□□□ -0.37
LdlrP35951 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.73□□□□□ -0.37
LdlrP35951 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LdlrP35951 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LdlrP35951 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LdlrP35951 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LdlrP35951 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.72□□□□□ -0.37
LdlrP35951 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.72□□□□□ -0.37
LdlrP35951 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.72□□□□□ -0.37
LdlrP35951 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LdlrP35951 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.72□□□□□ -0.37
LdlrP35951 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Gm15198-201ENSMUST00000117283 177 ntBASIC12.72□□□□□ -0.37
LdlrP35951 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.72□□□□□ -0.37
LdlrP35951 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LdlrP35951 Gm7561-201ENSMUST00000211203 886 ntBASIC12.72□□□□□ -0.37
LdlrP35951 Gm9257-201ENSMUST00000221254 232 ntBASIC12.72□□□□□ -0.37
LdlrP35951 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.72□□□□□ -0.37
LdlrP35951 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LdlrP35951 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.72□□□□□ -0.37
LdlrP35951 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms