Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfc1P35601 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.48□□□□□ -0.25
Rfc1P35601 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Rfc1P35601 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.48□□□□□ -0.25
Rfc1P35601 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rfc1P35601 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rfc1P35601 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfc1P35601 Gm9063-201ENSMUST00000223299 582 ntBASIC13.48□□□□□ -0.25
Rfc1P35601 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfc1P35601 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.48□□□□□ -0.25
Rfc1P35601 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rfc1P35601 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rfc1P35601 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.47□□□□□ -0.25
Rfc1P35601 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rfc1P35601 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.47□□□□□ -0.25
Rfc1P35601 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.47□□□□□ -0.25
Rfc1P35601 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.47□□□□□ -0.25
Rfc1P35601 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rfc1P35601 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rfc1P35601 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rfc1P35601 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.47□□□□□ -0.25
Rfc1P35601 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfc1P35601 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rfc1P35601 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.46□□□□□ -0.25
Rfc1P35601 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rfc1P35601 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.46□□□□□ -0.25
Rfc1P35601 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.46□□□□□ -0.25
Rfc1P35601 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.46□□□□□ -0.25
Rfc1P35601 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.46□□□□□ -0.25
Rfc1P35601 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.46□□□□□ -0.25
Rfc1P35601 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.46□□□□□ -0.25
Rfc1P35601 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rfc1P35601 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
Rfc1P35601 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfc1P35601 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfc1P35601 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfc1P35601 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfc1P35601 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfc1P35601 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfc1P35601 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfc1P35601 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfc1P35601 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Rfc1P35601 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfc1P35601 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.46□□□□□ -0.26
Rfc1P35601 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfc1P35601 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfc1P35601 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rfc1P35601 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rfc1P35601 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfc1P35601 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rfc1P35601 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.45□□□□□ -0.26
Rfc1P35601 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rfc1P35601 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.45□□□□□ -0.26
Rfc1P35601 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfc1P35601 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rfc1P35601 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfc1P35601 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.45□□□□□ -0.26
Rfc1P35601 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rfc1P35601 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms