Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Gm7774-201ENSMUST00000200064 533 ntBASIC14.3□□□□□ -0.12
Tpm3P21107 Gm18905-201ENSMUST00000205454 928 ntBASIC14.3□□□□□ -0.12
Tpm3P21107 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.3□□□□□ -0.12
Tpm3P21107 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.3□□□□□ -0.12
Tpm3P21107 Gm8227-201ENSMUST00000223306 571 ntBASIC14.3□□□□□ -0.12
Tpm3P21107 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.3□□□□□ -0.12
Tpm3P21107 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tpm3P21107 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Gm15240-201ENSMUST00000118156 720 ntBASIC14.29□□□□□ -0.12
Tpm3P21107 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.29□□□□□ -0.12
Tpm3P21107 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Tpm3P21107 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tpm3P21107 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tpm3P21107 Gm27622-201ENSMUST00000183779 60 ntBASIC14.29□□□□□ -0.12
Tpm3P21107 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.29□□□□□ -0.12
Tpm3P21107 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.29□□□□□ -0.12
Tpm3P21107 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tpm3P21107 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tpm3P21107 Gm38187-201ENSMUST00000195609 4709 ntBASIC14.29□□□□□ -0.12
Tpm3P21107 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.29□□□□□ -0.12
Tpm3P21107 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm3P21107 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.28□□□□□ -0.12
Tpm3P21107 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.28□□□□□ -0.12
Tpm3P21107 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Tpm3P21107 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.28□□□□□ -0.12
Tpm3P21107 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Tpm3P21107 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tpm3P21107 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm3P21107 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm3P21107 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm3P21107 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm3P21107 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm3P21107 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm3P21107 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tpm3P21107 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm3P21107 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm3P21107 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm3P21107 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms