Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Msx1P13297 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Msx1P13297 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Gm22323-201ENSMUST00000103832 109 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Msx1P13297 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.26□□□□□ -0.45
Msx1P13297 Gm13255-201ENSMUST00000117255 547 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.26□□□□□ -0.45
Msx1P13297 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Gm2991-201ENSMUST00000173338 480 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Gm25025-201ENSMUST00000175018 111 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Msx1P13297 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC12.26□□□□□ -0.45
Msx1P13297 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.26□□□□□ -0.45
Msx1P13297 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Msx1P13297 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.26□□□□□ -0.45
Msx1P13297 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.26□□□□□ -0.45
Msx1P13297 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.26□□□□□ -0.45
Msx1P13297 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msx1P13297 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.26□□□□□ -0.45
Msx1P13297 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Msx1P13297 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Gm11618-201ENSMUST00000117946 267 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.25□□□□□ -0.45
Msx1P13297 Gm25261-201ENSMUST00000157416 134 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Msx1P13297 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.25□□□□□ -0.45
Msx1P13297 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Gm7029-201ENSMUST00000173226 450 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Msx1P13297 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Msx1P13297 Gm2383-201ENSMUST00000181461 807 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.25□□□□□ -0.45
Msx1P13297 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Gm10146-201ENSMUST00000072739 309 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Gm16372-201ENSMUST00000073088 450 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Msx1P13297 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Msx1P13297 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Msx1P13297 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Msx1P13297 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx1P13297 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.25□□□□□ -0.45
Msx1P13297 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms