Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.8□□□□□ -0.2
RaraP11416 Gm14704-201ENSMUST00000120300 874 ntBASIC13.8□□□□□ -0.2
RaraP11416 Gm10156-201ENSMUST00000122364 462 ntBASIC13.8□□□□□ -0.2
RaraP11416 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.8□□□□□ -0.2
RaraP11416 Gm7287-201ENSMUST00000205267 602 ntBASIC13.8□□□□□ -0.2
RaraP11416 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.8□□□□□ -0.2
RaraP11416 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.8□□□□□ -0.2
RaraP11416 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.8□□□□□ -0.2
RaraP11416 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Gm26035-201ENSMUST00000083065 308 ntBASIC13.8□□□□□ -0.2
RaraP11416 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RaraP11416 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.8□□□□□ -0.2
RaraP11416 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RaraP11416 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.8□□□□□ -0.2
RaraP11416 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.8□□□□□ -0.2
RaraP11416 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RaraP11416 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.79□□□□□ -0.2
RaraP11416 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.79□□□□□ -0.2
RaraP11416 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RaraP11416 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
RaraP11416 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RaraP11416 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.79□□□□□ -0.2
RaraP11416 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.79□□□□□ -0.2
RaraP11416 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RaraP11416 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
RaraP11416 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RaraP11416 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RaraP11416 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RaraP11416 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RaraP11416 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.78□□□□□ -0.2
RaraP11416 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms