Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.13□□□□□ -0.63
PtcraP0C6B2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm13492-201ENSMUST00000119772 665 ntBASIC11.13□□□□□ -0.63
PtcraP0C6B2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm15703-201ENSMUST00000120250 880 ntBASIC11.13□□□□□ -0.63
PtcraP0C6B2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm16296-201ENSMUST00000159905 325 ntBASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm40466-201ENSMUST00000212174 422 ntBASIC11.13□□□□□ -0.63
PtcraP0C6B2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.13□□□□□ -0.63
PtcraP0C6B2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PtcraP0C6B2 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
PtcraP0C6B2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Gm13226-201ENSMUST00000117838 404 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 Gm13829-201ENSMUST00000119600 138 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 Gm14660-201ENSMUST00000119809 575 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.12□□□□□ -0.63
PtcraP0C6B2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.12□□□□□ -0.63
PtcraP0C6B2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.12□□□□□ -0.63
PtcraP0C6B2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms