Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NclP09405 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NclP09405 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NclP09405 Gm45638-201ENSMUST00000211507 2878 ntBASIC18.95■□□□□ 0.62
NclP09405 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Gm44405-201ENSMUST00000198952 126 ntBASIC18.94■□□□□ 0.62
NclP09405 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NclP09405 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC18.93■□□□□ 0.62
NclP09405 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
NclP09405 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Gm44094-201ENSMUST00000204703 2030 ntBASIC18.93■□□□□ 0.62
NclP09405 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC18.93■□□□□ 0.62
NclP09405 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Gm13875-201ENSMUST00000120162 282 ntBASIC18.93■□□□□ 0.62
NclP09405 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC18.93■□□□□ 0.62
NclP09405 Gm29199-201ENSMUST00000187766 775 ntBASIC18.93■□□□□ 0.62
NclP09405 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC18.93■□□□□ 0.62
NclP09405 AC159747.1-201ENSMUST00000219903 265 ntBASIC18.93■□□□□ 0.62
NclP09405 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC18.93■□□□□ 0.62
NclP09405 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
NclP09405 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Gm44891-201ENSMUST00000208817 2223 ntBASIC18.93■□□□□ 0.62
NclP09405 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC18.93■□□□□ 0.62
NclP09405 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NclP09405 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NclP09405 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NclP09405 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC18.92■□□□□ 0.62
NclP09405 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NclP09405 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NclP09405 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NclP09405 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Gm25214-201ENSMUST00000104573 129 ntBASIC18.92■□□□□ 0.62
NclP09405 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
NclP09405 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Gm4819-201ENSMUST00000182170 1009 ntBASIC18.92■□□□□ 0.62
NclP09405 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC18.92■□□□□ 0.62
NclP09405 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NclP09405 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NclP09405 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC18.92■□□□□ 0.62
NclP09405 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
NclP09405 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NclP09405 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC18.91■□□□□ 0.62
NclP09405 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NclP09405 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NclP09405 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Gm16296-201ENSMUST00000159905 325 ntBASIC18.91■□□□□ 0.62
NclP09405 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NclP09405 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC18.91■□□□□ 0.62
NclP09405 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms