Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PdgfrbP05622 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.95□□□□□ -0.34
PdgfrbP05622 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PdgfrbP05622 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PdgfrbP05622 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PdgfrbP05622 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PdgfrbP05622 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.94□□□□□ -0.34
PdgfrbP05622 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.94□□□□□ -0.34
PdgfrbP05622 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.94□□□□□ -0.34
PdgfrbP05622 Gm22121-201ENSMUST00000175148 54 ntBASIC12.94□□□□□ -0.34
PdgfrbP05622 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.94□□□□□ -0.34
PdgfrbP05622 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.94□□□□□ -0.34
PdgfrbP05622 Gm6266-201ENSMUST00000203844 806 ntBASIC12.94□□□□□ -0.34
PdgfrbP05622 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.94□□□□□ -0.34
PdgfrbP05622 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.94□□□□□ -0.34
PdgfrbP05622 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.94□□□□□ -0.34
PdgfrbP05622 Gm19163-201ENSMUST00000223313 780 ntBASIC12.94□□□□□ -0.34
PdgfrbP05622 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
PdgfrbP05622 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.94□□□□□ -0.34
PdgfrbP05622 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PdgfrbP05622 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PdgfrbP05622 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
PdgfrbP05622 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.93□□□□□ -0.34
PdgfrbP05622 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
PdgfrbP05622 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.93□□□□□ -0.34
PdgfrbP05622 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Snord83b-201ENSMUST00000104546 94 ntBASIC12.93□□□□□ -0.34
PdgfrbP05622 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Gm18363-201ENSMUST00000221671 730 ntBASIC12.93□□□□□ -0.34
PdgfrbP05622 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
PdgfrbP05622 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
PdgfrbP05622 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdgfrbP05622 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.93□□□□□ -0.34
PdgfrbP05622 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
PdgfrbP05622 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.92□□□□□ -0.34
PdgfrbP05622 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Rubie-203ENSMUST00000227803 2430 ntBASIC12.92□□□□□ -0.34
PdgfrbP05622 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PdgfrbP05622 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PdgfrbP05622 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PdgfrbP05622 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.92□□□□□ -0.34
PdgfrbP05622 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.92□□□□□ -0.34
PdgfrbP05622 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms